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Log-transforms the peak table of SummarzedExperiment or MetaboSet object. Shortcuts for log2 and log10 also implemented. For more information, see log.

Usage

# S4 method for class 'MetaboSet'
log(x, base = exp(1))

# S4 method for class 'MetaboSet'
log2(x)

# S4 method for class 'MetaboSet'
log10(x)

# S4 method for class 'SummarizedExperiment'
log(x, base = exp(1))

# S4 method for class 'SummarizedExperiment'
log2(x)

# S4 method for class 'SummarizedExperiment'
log10(x)

Arguments

x

a SummarizedExperiment or MetaboSet object

base

the base of the logarithm

Value

A SummarizedExperiment or MetaboSet object with peak table transformed.